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  "Title": "Recurrent Event Data Analysis",
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  "Description": "Contains implementations of recurrent event data analysis\nroutines including (1) survival and recurrent event data\nsimulation from stochastic process point of view by the\nthinning method proposed by Lewis and Shedler (1979)\n<doi:10.1002/nav.3800260304> and the inversion method\nintroduced in Cinlar (1975, ISBN:978-0486497976), (2) the mean\ncumulative function (MCF) estimation by the Nelson-Aalen\nestimator of the cumulative hazard rate function, (3)\ntwo-sample recurrent event responses comparison with the\npseudo-score tests proposed by Lawless and Nadeau (1995)\n<doi:10.2307/1269617>, (4) gamma frailty model with spline rate\nfunction following Fu, et al. (2016)\n<doi:10.1080/10543406.2014.992524>.",
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  "Date/Publication": "2025-09-04 02:15:02 UTC",
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  "Author": "Wenjie Wang [aut, cre] (ORCID: <https://orcid.org/0000-0003-0363-3180>),\nHaoda Fu [aut],\nSy Han (Steven) Chiou [ctb],\nJun Yan [ctb] (ORCID: <https://orcid.org/0000-0003-4401-7296>)",
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      "date": "2015-11-28"
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    "BIC",
    "check_Recur",
    "coef",
    "confint",
    "is.Recur",
    "mcf",
    "mcfDiff",
    "mcfDiff.test",
    "parametrize",
    "plot",
    "rateReg",
    "rateReg.control",
    "Recur",
    "show",
    "simEvent",
    "simEventData",
    "summary",
    "Survr"
  ],
  "_datasets": [
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      "title": "Simulated Sample Dataset for Demonstration",
      "object": "simuDat",
      "class": [
        "data.frame"
      ],
      "fields": [
        "ID",
        "time",
        "event",
        "group",
        "x1",
        "gender"
      ],
      "rows": 500,
      "table": true,
      "tojson": true
    },
    {
      "name": "valveSeats",
      "title": "Valve Seats Dataset",
      "object": "valveSeats",
      "class": [
        "data.frame"
      ],
      "fields": [
        "ID",
        "Days",
        "No."
      ],
      "rows": 89,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "AIC-rateReg-method",
      "title": "Akaike Information Criterion (AIC)",
      "topics": [
        "AIC,rateReg-method"
      ]
    },
    {
      "page": "as.character-Recur-method",
      "title": "Convert An Recur Object to A Character Vector",
      "topics": [
        "as.character,Recur-method"
      ]
    },
    {
      "page": "baseRate",
      "title": "Estimated Baseline Rate Function",
      "topics": [
        "baseRate",
        "baseRate,rateReg-method"
      ]
    },
    {
      "page": "baseRate.rateReg-class",
      "title": "An S4 Class Representing Estimated Baseline Rate Function",
      "topics": [
        "baseRate.rateReg-class"
      ]
    },
    {
      "page": "BIC-rateReg-method",
      "title": "Bayesian Information Criterion (BIC)",
      "topics": [
        "BIC,rateReg-method"
      ]
    },
    {
      "page": "check_Recur",
      "title": "Checks for Recurrent Event Data",
      "topics": [
        "check_Recur"
      ]
    },
    {
      "page": "coef-rateReg-method",
      "title": "Estimated Coefficients of Covariates",
      "topics": [
        "coef,rateReg-method"
      ]
    },
    {
      "page": "confint-rateReg-method",
      "title": "Confidence Intervals for Covariate Coefficients",
      "topics": [
        "confint,rateReg-method"
      ]
    },
    {
      "page": "is.Recur",
      "title": "Is the xect from the Recur class?",
      "topics": [
        "is.Recur"
      ]
    },
    {
      "page": "mcf",
      "title": "Mean Cumulative Function (MCF)",
      "topics": [
        "mcf",
        "mcf,formula-method",
        "mcf,rateReg-method"
      ]
    },
    {
      "page": "mcf.formula-class",
      "title": "An S4 Class Representing Sample MCF",
      "topics": [
        "mcf.formula-class"
      ]
    },
    {
      "page": "mcf.rateReg-class",
      "title": "An S4 Class Respresenting Estimated MCF from a Fitted Model",
      "topics": [
        "mcf.rateReg-class"
      ]
    },
    {
      "page": "mcfDiff",
      "title": "Comparing Two-Sample MCFs",
      "topics": [
        "-,mcf.formula,mcf.formula-method",
        "mcfDiff",
        "mcfDiff.test"
      ]
    },
    {
      "page": "mcfDiff-class",
      "title": "An S4 Class Representing Sample MCF Difference",
      "topics": [
        "mcfDiff-class"
      ]
    },
    {
      "page": "mcfDiff.test-class",
      "title": "An S4 Class Representing the Two-Sample Pseudo-Score Test Results",
      "topics": [
        "mcfDiff.test-class"
      ]
    },
    {
      "page": "parametrize",
      "title": "Parametrizations of Covariates and Covariate Coefficients",
      "topics": [
        "parametrize"
      ]
    },
    {
      "page": "plot-method",
      "title": "Plot Baseline Rate or Mean Cumulative Function (MCF)",
      "topics": [
        "plot,baseRate.rateReg,missing-method",
        "plot,baseRate.rateReg-method",
        "plot,mcf.formula,missing-method",
        "plot,mcf.formula-method",
        "plot,mcf.rateReg,missing-method",
        "plot,mcf.rateReg-method",
        "plot,mcfDiff,missing-method",
        "plot,mcfDiff-method",
        "plot-method"
      ]
    },
    {
      "page": "rateReg",
      "title": "Recurrent Events Regression Based on Counts and Rate Function",
      "topics": [
        "rateReg",
        "rateReg.control"
      ]
    },
    {
      "page": "rateReg-class",
      "title": "An S4 Class Representing a Fitted Model",
      "topics": [
        "rateReg-class"
      ]
    },
    {
      "page": "Recur",
      "title": "Formula Response for Recurrent Event Data",
      "topics": [
        "Recur"
      ]
    },
    {
      "page": "Recur-class",
      "title": "An S4 Class Representing Formula Response for Recurrent Event Data",
      "topics": [
        "Recur-class"
      ]
    },
    {
      "page": "Recur-to",
      "title": "Recurrent Episodes",
      "topics": [
        "%2%",
        "%to%",
        "Recur-to"
      ]
    },
    {
      "page": "show-method",
      "title": "Show an object.",
      "topics": [
        "show,mcf.formula-method",
        "show,mcf.rateReg-method",
        "show,mcfDiff-method",
        "show,mcfDiff.test-method",
        "show,rateReg-method",
        "show,Recur-method",
        "show,simEvent-method",
        "show,summary.rateReg-method",
        "show,summary.Recur-method",
        "show,summaryRateReg-method",
        "show-method"
      ]
    },
    {
      "page": "simEvent",
      "title": "Simulated Survival times or Recurrent Events",
      "topics": [
        "simEvent",
        "simEventData"
      ]
    },
    {
      "page": "simEvent-class",
      "title": "An S4 Class for Simulated Recurrent Event or Survival Times",
      "topics": [
        "simEvent-class"
      ]
    },
    {
      "page": "simuDat",
      "title": "Simulated Sample Dataset for Demonstration",
      "topics": [
        "simuDat"
      ]
    },
    {
      "page": "summary-rateReg-method",
      "title": "Summarizing a Fitted Model",
      "topics": [
        "summary,rateReg-method"
      ]
    },
    {
      "page": "summary-Recur-method",
      "title": "Summarize an 'Recur' object",
      "topics": [
        "summary,Recur-method"
      ]
    },
    {
      "page": "summary.rateReg-class",
      "title": "An S4 Class Representing Summary of a Fitted Model",
      "topics": [
        "summary.rateReg-class"
      ]
    },
    {
      "page": "summary.Recur-class",
      "title": "An S4 Class for Summarized Recur Object",
      "topics": [
        "summary.Recur-class"
      ]
    },
    {
      "page": "Survr",
      "title": "Formula Response for Recurrent Event Data",
      "topics": [
        "Survr"
      ]
    },
    {
      "page": "Survr-class",
      "title": "An S4 Class Representing Formula Response",
      "topics": [
        "Survr-class"
      ]
    },
    {
      "page": "valveSeats",
      "title": "Valve Seats Dataset",
      "topics": [
        "valveSeats"
      ]
    }
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      "title": "Introduction to Formula Response Function Recur()",
      "author": "Wenjie Wang",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Overview",
        "Function Interface",
        "The Recur Object",
        "Usage",
        "When only time is given",
        "When time and id are given",
        "Helper %to% for recurrent episodes",
        "About origin  and terminal",
        "Data Checking Rules",
        "The Show() Method",
        "The Valve Seats Example",
        "On Missing times",
        "Number of digits"
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      "created": "2019-10-30 03:01:02",
      "modified": "2020-08-15 16:58:28",
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      "author": "Wenjie Wang",
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        "Data checking",
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        "Gamma frailty model",
        "Model with constant rate function",
        "Model with piecewise constant rate function",
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      "title": "Simulate Survival and Recurrent Event Data with reda",
      "author": "Wenjie Wang",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Intensity function",
        "Relative risk model",
        "Accelerated failure time model",
        "Intensity function in general form",
        "Sampling methods",
        "Getting started",
        "Poisson process",
        "Homogeneous Poisson process",
        "Nonhomogeneous Poisson process",
        "Renewal processes",
        "Beyond time-invariance",
        "Time-variant covariates",
        "Time-variant covariate coefficients",
        "Frailty models",
        "Frailty for individual processes",
        "Shared frailty for clusters",
        "Common parametric survival models",
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        "Log-normal model",
        "Reference"
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      "created": "2017-11-10 04:45:34",
      "modified": "2020-03-25 15:18:46",
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